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rBiopaxParser (version 2.10.0)

listComplexComponents: This function lists all components of a given complex.

Description

This function returns a (unique) data.frame listing all component IDs, names and classes of the supplied complex.

Usage

listComplexComponents(biopax, id, returnIDonly = FALSE, biopaxlevel = 3)

Arguments

biopax
A biopax model
id
string. A complex ID
returnIDonly
logical. If TRUE only IDs of the components are returned. This saves tiem for looking up names for every single ID.
biopaxlevel
integer. Set the biopax level here if you supply a data.table directly.

Value

data.frame

Examples

Run this code
# load data
 data(biopaxexample)
 listComplexComponents(biopax, id="ex_m_100650")

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