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rEDM

Concept (all versions) DOI:

Please see DESCRIPTION for the R package details.

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Version

Install

install.packages('rEDM')

Monthly Downloads

665

Version

0.7.2

License

file LICENSE

Maintainer

Sugihara Maintainer

Last Published

December 10th, 2018

Functions in rEDM (0.7.2)

e054_succession

Succession data at the Cedar Creek LTER

Take output from ccm and compute means as a function of library size.

Compute performance metrics for predictions

Make a lagged block for multiview

Perform forecasting using multiview embedding

paramecium_didinium

Time series for the Paramecium-Didinium laboratory experiment

make_surrogate_data

Generate surrogate data for permutation/randomization tests

Perform univariate forecasting using Gaussian processes

Time series for a tent map with mu = 2.

Time series for a three-species coupled model.

Perform generalized forecasting using Gaussian processes

Applications of empirical dynamic modeling from time series.

sardine_anchovy_sst

Time series for the California Current Anchovy-Sardine-SST system

Perform generalized forecasting using simplex projection or s-map

Perform convergent cross mapping using simplex projection

Perform univariate forecasting

sockeye_returns

Time series for sockeye salmon returns.

two_species_model

Time series for a two-species coupled model.

test_nonlinearity

Randomization test for nonlinearity using S-maps and surrogate data

Apple-blossom Thrips time series

e120_biodiversity

Biodiversity data at the Cedar Creek LTER