sardine_anchovy_sst

Time series of Pacific sardine landings (CA), Northern anchovy 
 landings (CA), and sea-surface temperature (3-year average) at the SIO 
 pier and Newport pier

datasets

An implementation of 'EDM' algorithms based on research software developed for internal use at the Sugihara Lab ('UCSD/SIO'). The package is implemented with 'Rcpp' wrappers around the 'cppEDM' library. It implements the 'simplex' projection method from Sugihara & May (1990) <doi:10.1038/344734a0>, the 'S-map' algorithm from Sugihara (1994) <doi:10.1098/rsta.1994.0106>, convergent cross mapping described in Sugihara et al. (2012) <doi:10.1126/science.1227079>, and, 'multiview embedding' described in Ye & Sugihara (2016) <doi:10.1126/science.aag0863>.

Joseph Park

rEDM

Empirical Dynamic Modeling ('EDM')

Cameron Smith

George Sugihara

Ethan Deyle

Erik Saberski

Hao Ye

The Regents of the University of California 

sardine_anchovy_sst function

<dl>
 <dt><code>year</code></dt>
<dd>year of measurement</dd> <dt><code>anchovy</code></dt>
<dd>anchovy landings, scaled to mean = 0, sd = 1</dd> <dt><code>sardine</code></dt>
<dd>sardine landings, scaled to mean = 0, sd = 1</dd> <dt><code>sio_sst</code></dt>
<dd>3-year running average of sea surface temperature at 
 SIO pier, scaled to mean = 0, sd = 1</dd> <dt><code>np_sst</code></dt>
<dd>3-year running average of sea surface temperature at 
 Newport pier, scaled to mean = 0, sd = 1</dd>
</dl>

Format

Time series for the California Current Anchovy-Sardine-SST system — sardine_anchovy_sst

<dl>
 <dt><code>year</code></dt>
<dd>year of measurement</dd>

 <dt><code>anchovy</code></dt>
<dd>anchovy landings, scaled to mean = 0, sd = 1</dd>

 <dt><code>sardine</code></dt>
<dd>sardine landings, scaled to mean = 0, sd = 1</dd>

 <dt><code>sio_sst</code></dt>
<dd>3-year running average of sea surface temperature at 
 SIO pier, scaled to mean = 0, sd = 1</dd>

 <dt><code>np_sst</code></dt>
<dd>3-year running average of sea surface temperature at 
 Newport pier, scaled to mean = 0, sd = 1</dd>


</dl>

sardine_anchovy_sst: Time series for the California Current Anchovy-Sardine-SST system

Description

Usage

Arguments

Format