rERR (version 0.1)

f_to_event_table_wf_all: Data transformation: Wide format -> Event format required for the model

Description

This function organize an input data set wf (wide format, same input as in Epicrue Peanuts), to the required ef data set for the model. It appends an index of person event 1,2..n,0 if a subject has n doses (or grouped doses), and being the 0-row the exit conditions: exit time, exit dose and the outcome. Also creates the cumulated dose.

Usage

f_to_event_table_wf_all(formula, data, id_name, doses, times, covars)

Arguments

formula

Surv(entry_time,exit_time,outcome)~loglin(loglin_var1,..,loglin_varn)+ lin(lin_var1,..,lin_varm)+strata(strat_var1,...strat_varp)

data

input data set - event format data set

id_name

name of variable containing the names of subjects

doses

sub data set of grouped doses

times

sub data set of times relatives to doses

covars

sub data set of the covars that will be involved in the model

Value

The data set with the event-row format, including the event of exit of the cohort

Examples

# NOT RUN {
f_to_event_table_wf_all(formula,data,id_name='patientids',doses=data[,31:50],
                             times=data[,11:30],covars=data[,c('sex','country','birthcohort')])
# }