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rGADEM (version 2.20.0)
de novo motif discovery
Description
rGADEM is an efficient de novo motif discovery tool for large-scale genomic sequence data. It is an open-source R package, which is based on the GADEM software.
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Version
Version
2.20.0
2.18.0
2.16.0
2.14.0
Version
2.20.0
License
Artistic-2.0
Maintainer
Arnaud Droit
Last Published
February 15th, 2017
Functions in rGADEM (2.20.0)
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GADEM
Motif Analysis with rGADEM
motif-class
Class "motif"
align-class
Class "align"
readPWMfile
Read Transfac File
parameters-class
Class "parameters"
gadem-class
Class "gadem"