rMVP (version 1.0.8)

MVP.calk: Calculate Kinship matrix by Blocking strategy

Description

Build date: Apr 14, 2021 Last update: Apr 14, 2021

Usage

MVP.calk(M, step = 1000)

Value

K, n * n matrix

Arguments

M

Genotype, m * n, m is marker size, n is population size

step

Number of markers processed at one time

Examples

genoPath <- system.file("extdata", "06_mvp-impute", "mvp.imp.geno.desc", package = "rMVP")
genotype <- attach.big.matrix(genoPath)
print(dim(genotype))

K <- MVP.calk(genotype)