rSFFreader (version 0.20.0)

readSffGeometry: Read in basic statistics about an sff file

Description

readSffGeometry processes a sff file or set of sff files, counting the number of reads and the length of each read.

Usage

readSffGeometry(filenames)

Arguments

filenames

File or files to be read in.

Value

list with two elements, nReads and Read_Widths

Examples

sffgeom <- readSffGeometry(system.file("extdata","Small454Test.sff",package="rSFFreader"))
sffgeom$nReads
sffgeom$Read_Widths