rTwig (version 1.4.0)

correct_radii: Correct Radii

Description

Corrects cylinder radii

Usage

correct_radii(cylinder, twig_radius, broken_branch = TRUE)

Value

Returns a data frame

Arguments

cylinder

QSM cylinder data frame

twig_radius

Twig radius in millimeters

broken_branch

Enable or disable the broken branch filter. Defaults to enabled (TRUE).

Examples

## TreeQSM Processing Chain
file <- system.file("extdata/QSM.mat", package = "rTwig")
qsm <- import_treeqsm(file)
cylinder <- qsm$cylinder
cylinder <- update_cylinders(cylinder)
cylinder <- correct_radii(cylinder, twig_radius = 4.23)
str(cylinder)