myplclust

hclust

a character vector of labels of the leaves of the tree

labels

colour for the labels; NA=default device foreground colour

lab.col

as in <code><a rd-options="" href="/link/hclust?package=rafalib&version=1.0.0" data-mini-rdoc="rafalib::hclust">hclust</a></code> & <code><a rd-options="" href="/link/plclust?package=rafalib&version=1.0.0" data-mini-rdoc="rafalib::plclust">plclust</a></code>

hang

xlab

further arguments passed to <code><a rd-options="" href="/link/plot?package=rafalib&version=1.0.0" data-mini-rdoc="rafalib::plot">plot</a></code>

Modifiction of plclust for plotting hclust objects in *in colour*!

A series of shortcuts for routine tasks originally developed by Rafael A. Irizarry to facilitate data exploration.

Rafael A Irizarry

rafalib

Convenience Functions for Routine Data Exploration

myplclust function

<dl><dt>hclust</dt>
<dd>hclust object</dd>
<dt>labels</dt>
<dd>a character vector of labels of the leaves of the tree</dd>
<dt>lab.col</dt>
<dd>colour for the labels; NA=default device foreground colour</dd>
<dt>hang</dt>
<dd>as in <code><a href="/link/hclust?package=rafalib&version=1.0.0" data-mini-rdoc="rafalib::hclust">hclust</a></code> &amp; <code><a href="/link/plclust?package=rafalib&version=1.0.0" data-mini-rdoc="rafalib::plclust">plclust</a></code></dd>
<dt>xlab</dt>
<dd>title for x-axis (defaults to no title)</dd>
<dt>sub</dt>
<dd>subtitle (defualts to no subtitle)</dd>
<dt>...</dt>
<dd>further arguments passed to <code><a href="/link/plot?package=rafalib&version=1.0.0" data-mini-rdoc="rafalib::plot">plot</a></code></dd></dl>

Arguments

Author

plclust in colour — myplclust

<dl>

<dt>hclust</dt>
<dd>hclust object</dd>


<dt>labels</dt>
<dd>a character vector of labels of the leaves of the tree</dd>


<dt>lab.col</dt>
<dd>colour for the labels; NA=default device foreground colour</dd>


<dt>hang</dt>
<dd>as in <code><a href='https://rdrr.io/r/stats/hclust.html'>hclust</a></code> &amp; <code><a href='https://rdrr.io/r/stats/stats-defunct.html'>plclust</a></code></dd>


<dt>xlab</dt>
<dd>title for x-axis (defaults to no title)</dd>


<dt>sub</dt>
<dd>subtitle (defualts to no subtitle)</dd>


<dt>...</dt>
<dd>further arguments passed to <code><a href='https://rdrr.io/r/graphics/plot.default.html'>plot</a></code></dd>

</dl>

myplclust: plclust in colour

Description

Usage

Arguments

Author