bm_propose_trio


	vector with current ancestor value (x & y).
	


	vector with current first daughter value (x & y).
	


	vector with current second daughter value (x & y).
	


	time separating node being proposed from ancestor.
	


	time separating node being proposed from first daughter.
	


	time separating node being proposed from second ancestor.
	

sigma2x

sigma2y

internal

The rase package primarily implements the Range Ancestral State Estimation for phylogeography described in Quintero, I., Keil, P., Jetz, W., & Crawford, F. W. (2015). Historical Biogeography Using Species Geographical Ranges. Systematic biology, 64(6), 1059-1073. It also includes Bayesian inference of ancestral states under a Brownian Motion model of character evolution and Maximum Likelihood estimation of rase for n-dimensional data. Visualizing functions in 3D are implemented using the rgl package.

bm_propose_trio: MCMC proposal for a 2-dimensional point with two daughters and one ancestor nodes

Description

Usage

Arguments

Value

References

See Also