ravecore (version 0.1.0)

prepare_subject_with_epochs: 'RAVE' repository: with epochs

Description

'RAVE' repository: with epochs

Usage

prepare_subject_with_epochs(
  subject,
  electrodes = NULL,
  reference_name = NULL,
  epoch_name = NULL,
  time_windows = NULL,
  stitch_events = NULL,
  ...,
  quiet = FALSE,
  repository_id = NULL,
  strict = TRUE
)
prepare_subject_raw_voltage_with_epochs(
  subject,
  electrodes = NULL,
  epoch_name = NULL,
  time_windows = NULL,
  stitch_events = NULL,
  ...,
  quiet = TRUE,
  repository_id = NULL,
  strict = TRUE
)
prepare_subject_voltage_with_epochs(
  subject,
  electrodes = NULL,
  reference_name = NULL,
  epoch_name = NULL,
  time_windows = NULL,
  stitch_events = NULL,
  ...,
  quiet = FALSE,
  repository_id = NULL,
  strict = TRUE
)
prepare_subject_time_frequency_coefficients_with_epochs(
  subject,
  electrodes = NULL,
  reference_name = NULL,
  epoch_name = NULL,
  time_windows = NULL,
  stitch_events = NULL,
  ...,
  quiet = FALSE,
  repository_id = NULL,
  strict = TRUE
)
prepare_subject_power_with_epochs(
  subject,
  electrodes = NULL,
  reference_name = NULL,
  epoch_name = NULL,
  time_windows = NULL,
  stitch_events = NULL,
  ...,
  quiet = FALSE,
  repository_id = NULL,
  strict = TRUE
)
prepare_subject_power(
  subject,
  electrodes = NULL,
  reference_name = NULL,
  epoch_name = NULL,
  time_windows = NULL,
  stitch_events = NULL,
  ...,
  quiet = FALSE,
  repository_id = NULL,
  strict = TRUE
)
prepare_subject_phase_with_epochs(
  subject,
  electrodes = NULL,
  reference_name = NULL,
  epoch_name = NULL,
  time_windows = NULL,
  stitch_events = NULL,
  ...,
  quiet = FALSE,
  repository_id = NULL,
  strict = TRUE
)

Value

A RAVESubjectEpochRepository instance

Arguments

subject

'RAVE' subject

electrodes

string or integers indicating electrodes to load

reference_name

name of the reference table

epoch_name

name of the epoch trial table

time_windows

numeric vector with even lengths, the time start and end of the trials, for example, c(-1, 2) means load 1 second before the trial onset and 2 seconds after trial onset

stitch_events

events where the time_windows is based; default is trial onset (NULL)

...

passed to RAVESubjectBaseRepository constructor

quiet

see field quiet

repository_id

see field repository_id

strict

whether to check existence of subject before loading data; default is true

Examples

if( has_rave_subject("demo/DemoSubject") ) {


repository <- prepare_subject_with_epochs(
  "demo/DemoSubject", electrodes = 14:16,
  reference_name = "default", epoch_name = "auditory_onset",
  time_windows = c(-1, 2))

print(repository)

head(repository$epoch$table)

electrodes <- repository$electrode_instances

# Channel 14
e <- electrodes$e_14

# referenced voltage
voltage <- e$load_data_with_epochs("voltage")

# 6001 time points (2000 sample rate)
# 287 trials
# 1 channel
dim(voltage)

ravetools::plot_signals(t(voltage[, 1:10, 1]),
                        sample_rate = 2000,
                        ylab = "Trial",
                        main = "First 10 trials")

}