Learn R Programming

⚠️There's a newer version (3.3.1) of this package.Take me there.

rbacon (version 2.4.2)

Age-Depth Modelling using Bayesian Statistics

Description

An approach to age-depth modelling that uses Bayesian statistics to reconstruct accumulation histories for deposits, through combining radiocarbon and other dates with prior information. See Blaauw & Christen (2011) .

Copy Link

Version

Install

install.packages('rbacon')

Monthly Downloads

1,361

Version

2.4.2

License

GPL (>= 2)

Maintainer

Maarten Blaauw

Last Published

April 21st, 2020

Functions in rbacon (2.4.2)

A.modelled

Calculate modelled 210Pb
Bacon.cleanup

Remove files made to produce the current core's age-depth model.
accrate.age.ghost

Plot a core's accumulation rates against calendar time.
Bacon.hist

Calculate age distributions of depths.
accrate.age

Obtain estimated accumulation rates for any age of a core.
Baconvergence

Test to identify poorly mixed MCMC runs.
Bacon.Age.d

Output all ages for a single depth.
accrate.depth

Obtain estimated accumulation rates as for any depth of a core.
age.pMC

Calculate pMC values from C14 ages
AgesOfEvents

Event probabilities against calendar age
agedepth

Plot an age-depth model
clam2bacon

Translate clam .csv files to Bacon .csv files.
accrate.depth.ghost

Plot modelled accumulation rates against the depths of a core.
calib.plot

Plot the dates
copyCalibrationCurve

Copy a calibration curve.
draw.pbmodelled

Plot the 210Pb data
flux.age.ghost

Plot flux rates for proxies.
calib.plumbacon.plot

Plot the dates
bacon2clam

Translate Bacon .csv files to clam .csv files.
Bacon

Main age-depth modelling function
scissors

Remove the first n iterations.
agemodel.it

Extract one age-model iteration
pMC.age

Calculate C14 ages from pMC values.
mix.curves

Build a custom-made, mixed calibration curve.
add.dates

Add dates to age-depth plots
proxy.ghost

Proxies analysed along the depths of a core can be plotted as 'proxy-ghost' graphs against calendar time while taking into account chronological uncertainties. Here darker grey indicates more likely calendar ages for specific proxy values.
thinner

Thin iterations.
rbacon

rbacon