bi_generate_dataset

This function is deprecated and has been renamed to
<code>generate_dataset</code>

Provides a complete interface to 'LibBi', a library for Bayesian
inference (see <https://libbi.org> and Murray, 2015
<doi:10.18637/jss.v067.i10> for more information). This includes functions
for manipulating 'LibBi' models, for reading and writing 'LibBi'
input/output files, for converting 'LibBi' output to provide traces for use
with the coda package, and for running 'LibBi' to conduct inference.

Sebastian Funk

Interface to 'LibBi'

Pierre E. Jacob

Anthony Lee

Lawrence M. Murray

Sam Abbott

bi_generate_dataset function

<dl><dt>...</dt>
<dd>arguments to be passed to <code>sample.libbi</code>, especially
'model', 'end_time' and 'seed'.</dd>
<dt>output_every</dt>
<dd>real; if given, <code>noutputs</code> will be set so that there
is output every <code>output_every</code> time steps; if set to 0, only generate
an output at the final time</dd></dl>

Arguments

Bi Generate Dataset — bi_generate_dataset

<dl>

<dt>...</dt>
<dd>arguments to be passed to <code>sample.libbi</code>, especially
'model', 'end_time' and 'seed'.</dd>


<dt>output_every</dt>
<dd>real; if given, <code>noutputs</code> will be set so that there
is output every <code>output_every</code> time steps; if set to 0, only generate
an output at the final time</dd>

</dl>

bi_generate_dataset: Bi Generate Dataset

Description

Usage

Value

Arguments