simulate

simulate.libbi

simulate.bi_model

The method <code>simulate</code> launches <code>LibBi</code> to simulate a model by
 passing `target="joint"` to <code>LibBi</code>
If <code>x</code> is given as a 'bi_model', a <code>libbi</code> object will be
 created from the model

Provides a complete interface to 'LibBi', a library for Bayesian
inference (see <https://libbi.org> and Murray, 2015
<doi:10.18637/jss.v067.i10> for more information). This includes functions
for manipulating 'LibBi' models, for reading and writing 'LibBi'
input/output files, for converting 'LibBi' output to provide traces for use
with the coda package, and for running 'LibBi' to conduct inference.

Sebastian Funk

Interface to 'LibBi'

Pierre E. Jacob

Anthony Lee

Lawrence M. Murray

Sam Abbott

simulate function

<dl><dt>x</dt>
<dd>a <code>libbi</code> or <code>bi_model</code> object, or the name
of a file containing the model</dd>
<dt>...</dt>
<dd>options to be passed to <code>run.libbi</code></dd></dl>

Arguments

Using the LibBi wrapper to simulate — simulate

<dl>

<dt>x</dt>
<dd>a <code>libbi</code> or <code>bi_model</code> object, or the name
of a file containing the model</dd>


<dt>...</dt>
<dd>options to be passed to <code>run.libbi</code></dd>

</dl>

simulate: Using the LibBi wrapper to simulate

Description

Usage

Value

Arguments