rbioapi (version 0.8.1)

rba_uniprot_proteomics: Get Proteomics Peptides Mapped to UniProt Protein

Description

UniProt maps proteomics peptides from different sources to the proteins' sequences. Using this function, you can retrieve all the proteomics peptides features that has been map to a given UniProt protein's sequence.

Usage

rba_uniprot_proteomics(accession, ...)

Value

A list containing the proteomics peptides features of your supplied UniProt protein's sequence.

Arguments

accession

UniProtKB primary or secondary accession.

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Corresponding API Resources

"GET https://www.ebi.ac.uk/proteins/api/proteomics/{accession}"

References

• The UniProt Consortium, UniProt: the universal protein knowledgebase in 2021, Nucleic Acids Research, Volume 49, Issue D1, 8 January 2021, Pages D480–D489, https://doi.org/10.1093/nar/gkaa1100

• Andrew Nightingale, Ricardo Antunes, Emanuele Alpi, Borisas Bursteinas, Leonardo Gonzales, Wudong Liu, Jie Luo, Guoying Qi, Edd Turner, Maria Martin, The Proteins API: accessing key integrated protein and genome information, Nucleic Acids Research, Volume 45, Issue W1, 3 July 2017, Pages W539–W544, https://doi.org/10.1093/nar/gkx237

• Proteins API Documentation

• Citations note on UniProt website

See Also

Other "UniProt - Proteomics": rba_uniprot_proteomics_search()

Examples

# \donttest{
rba_uniprot_proteomics(accession = "P25942")
# }