rbioapi (version 0.8.2)

rba_jaspar_releases: Get information about JASPAR database releases

Description

If a release number was supplied, this function will return the details of that release. Otherwise, if the function was called without "release" argument, a list of all JASPAR database releases will be returned.

Usage

rba_jaspar_releases(release_number = NULL, ...)

Value

A list that contains all JASPAR database releases' information or details of a particular release.

Arguments

release_number

Numeric: Which JASPAR database release number information's to retrieve? If left NULL (the default), a list of all JASPAR database releases will be returned. Available options are 1 to 8.

...

rbioapi option(s). See rba_options's arguments manual for more information on available options.

Corresponding API Resources

"GET https://jaspar.elixir.no/api/v1/releases/"
"GET https://jaspar.elixir.no/api/v1/releases/{release_number}/"

References

• Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Chèneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles Nucleic Acids Res. in_press; doi: 10.1093/nar/gkad1059

• Khan, A. and Mathelier, A. JASPAR RESTful API: accessing JASPAR data from any programming language. Bioinformatics, 2017, doi: 10.1093/bioinformatics/btx804

• JASPAR API Documentation

• Citations note on JASPAR website

See Also

Other "JASPAR": rba_jaspar_collections(), rba_jaspar_collections_matrices(), rba_jaspar_matrix(), rba_jaspar_matrix_search(), rba_jaspar_matrix_versions(), rba_jaspar_sites(), rba_jaspar_species(), rba_jaspar_species_matrices(), rba_jaspar_taxons(), rba_jaspar_taxons_matrices(), rba_jaspar_tffm(), rba_jaspar_tffm_search()

Examples

# \donttest{
rba_jaspar_releases()
rba_jaspar_releases(7)
# }