getDrugActivityData

A string specifying the NSC identifiers for the compounds.

nscSet

A logical value indicating whether to compute results
using only experimental data included in CellMiner (default=TRUE).

onlyCellMinerExps

Returns a matrix containing activity (-logGI50) data for a set of compounds.

The NCI-60 cancer cell line panel has been used over the course of
  several decades as an anti-cancer drug screen. This panel was developed as
  part of the Developmental Therapeutics Program (DTP, http://dtp.nci.nih.gov/)
  of the U.S. National Cancer Institute (NCI). Thousands of compounds have been
  tested on the NCI-60, which have been extensively characterized by many
  platforms for gene and protein expression, copy number, mutation, and others
  (Reinhold, et al., 2012). The purpose of the CellMiner project
  (http://discover.nci.nih.gov/cellminer) has been to integrate data
  from multiple platforms used to analyze the NCI-60 and to provide a powerful
  suite of tools for exploration of NCI-60 data.

getDrugActivityData: Returns a matrix containing activity (-logGI50) data for a set of compounds.

Description

Usage

Arguments

Value

concept

Examples