relativeentropy-class

Container for class <code>relativeentropy</code>.

Provides a framework for the measurement and partitioning of
the (similarity-sensitive) biodiversity of a metacommunity and its
constituent subcommunities. Richard Reeve, et al. (2015)
<arXiv:1404.6520v3>.

Sonia Mitchell

rdiversity

Measurement and Partitioning of Similarity-Sensitive
Biodiversity

Richard Reeve

relativeentropy-class function

<dl class="dl-horizontal">
<dt><code>results</code></dt><dd>object of class <code>matrix</code> of mode <code>numeric</code>; contains
diversity term values output from <code>raw_beta()</code> or <code>norm_beta()</code></dd></dl><dt><code>measure</code></dt><dd>measure</dd><dt><code>type_abundance</code></dt><dd>two-dimensional <code>matrix</code> of mode <code>numeric</code>; 
contains proportional abundance of types in the subcommunity 
as a fraction of the metacommunity as a whole (in the phylogenetic case, 
this corresponds to the proportional abundance of historic species, which
is calculated from the proportional abundance of present day species)</dd><dt><code>ordinariness</code></dt><dd>two-dimensional <code>matrix</code> of mode <code>numeric</code>; 
contains ordinariness of types</dd><dt><code>subcommunity_weights</code></dt><dd><code>vector</code> of mode <code>numeric</code>; contains
subcommunity weights</dd><dt><code>type_weights</code></dt><dd>two-dimensional <code>matrix</code> of mode <code>numeric</code>; 
contains weight of types within a subcommunity</dd>

relativeentropy-class: relativeentropy-class

Description

Arguments

Fields

References