phy2dist

object of class <code>phylo</code>.

tree

object of class <code>logical</code> or <code>numeric</code>.
When TRUE (by default) a distance matrix is generated and stored in slot
<code>distance</code>, when FALSE no distance matrix is generated, and when numeric
a distance matrix is generated until the number of species exceeds the
defined value.

precompute_dist

Converts any <code>phylo</code> object to a matrix of pairwise tip-to-tip distances.

Provides a framework for the measurement and partitioning of
the (similarity-sensitive) biodiversity of a metacommunity and its
constituent subcommunities. Richard Reeve, et al. (2016)
<arXiv:1404.6520v3>.

Sonia Mitchell

phy2dist: Phylogenetic pairwise tip distance matrix

Description

Usage

Arguments

Value