Calculates similarity-sensitive raw metacommunity alpha diversity (the
naive-community metacommunity diversity). This measure may be calculated
for a series of orders, represented as a vector of qs.
Usage
raw_meta_alpha(meta, qs)
Value
raw_meta_alpha returns a standard output of class rdiv
Arguments
meta
object of class metacommunity
qs
vector of mode numeric containing q values
References
R. Reeve, T. Leinster, C. Cobbold, J. Thompson, N. Brummitt,
S. Mitchell, and L. Matthews. 2016. How to partition diversity.
arXiv 1404.6520v3:1–9.
pop <- data.frame(a = c(1,3), b = c(1,1))
row.names(pop) <- paste0("sp", 1:2)
pop <- pop/sum(pop)
meta <- metacommunity(pop)
# Calculate raw metacommunity alpha diversityraw_meta_alpha(meta, 0:2)