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readBrukerFlexData (version 1.5)

Reads mass spectrometry data in Bruker *flex format

Description

Reads files generated by MALDI-TOF MS of Bruker Daltonics' *flex series.

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Install

install.packages('readBrukerFlexData')

Monthly Downloads

407

Version

1.5

License

GPL (>= 3)

Issues

1

Pull Requests

0

Stars

14

Forks

5

Maintainer

Sebastian Gibb

Last Published

October 22nd, 2012

Functions in readBrukerFlexData (1.5)

.readAcquFile

Reads an acqu file.
.grepAcquValue

Extracts values from acqu file.
readBrukerFlexFile

Reads mass spectrometry data in Bruker Daltonics' XMASS format.
.tof2mass

Calculates mass from time-of-flight values.
readBrukerFlexDir

Reads recursively mass spectrometry data in Bruker Daltonics' XMASS format.
.sampleName

Creates sample name.
cpSpecHpcMzXml

Mass spectrum generated by Bruker Daltonics' CompassXport
readBrukerFlexData-package

The readBrukerFlexData Package
mqReadBrukerFlex

Reads mass spectrometry data into MALDIquant.
.changePrecision

Change precision.
.readFidFile

Reads binary fid file.
.hpc

High Precision Calibration
.extractHPCConstants

Extracts High Precision Calibration coefficients.
.grepAcquDoubleValue

Extracts values from acqu file.
.double2singlePrecision

Converts double to single precision.