plot.RWDRI: Standard plot method for objects of class 'RWDRI'

Description

Standard plot method for objects of class 'RWDRI'

Usage

# S3 method for RWDRI
plot(
  x,
  Scale = c("original", "transformed", "zScore"),
  RIperc = c(0.025, 0.975),
  Nhist = 60,
  showMargin = TRUE,
  showPathol = FALSE,
  scalePathol = TRUE,
  showBSModels = FALSE,
  showValue = TRUE,
  uncertaintyRegion = c("bootstrapCI", "uncertaintyMargin"),
  CIprop = 0.95,
  UMprop = 0.9,
  pointEst = c("fullDataEst", "medianBS"),
  colScheme = c("green", "blue"),
  xlim = NULL,
  ylim = NULL,
  xlab = NULL,
  ylab = NULL,
  title = NULL,
  ...
)

Value

			The applied plot limits in x-direction (xlim) are returned.

Arguments

x: (object) of class 'RWDRI'
Scale: (character) specifying if percentiles are shown on the original scale ("or") or the transformed scale ("tr") or the z-Score scale ("z")
RIperc: (numeric) value specifying the percentiles, which define the reference interval (default c(0.025, 0.975))
Nhist: (integer) number of bins in the histogram (derived automatically if not set)
showMargin: (logical) specifying if the specified margins, i.e. confidence intervals or uncertainty margins, shall be shown
showPathol: (logical) specifying if the estimated pathological distribution shall be shown
scalePathol: (logical) specifying if the estimated pathological distribution shall be weighted with the ration of pathol/non-pathol
showBSModels: (logical) specifying if the estimated bootstrapping models shall be shown
showValue: (logical) specifying if the exact value of the estimated reference intervals shall be shown above the plot
uncertaintyRegion: (character) specifying the type of the uncertainty region around point estimates
CIprop: (numeric) value specifying the central region for estimation of confidence intervals
UMprop: (numeric) value specifying the central region for estimation of uncertainty margins
pointEst: (character) specifying the point estimate determination: (1) using the full dataset ("fullDataEst"), (2) calculating the median model from the bootstrap samples ("medianBS"), (2) works only if NBootstrap > 0
colScheme: (character) specifying color scheme of the non-pathological distribution and reference interval; choices are "green" and "blue"
xlim: (numeric) vector specifying the limits in x-direction
ylim: (numeric) vector specifying the limits in y-direction
xlab: (character) specifying the x-axis label
ylab: (character) specifying the y-axis label
title: (character) specifying plot title
...: additional arguments passed forward to other functions

Author

Christopher Rank christopher.rank@roche.com, Tatjana Ammer tatjana.ammer@roche.com