haplohh_cgu_bta12


  The object contains haplotype data for 140 cattle individuals (280 haplotypes) belonging to the Creole breed from Guadeloupe (CGU) and 1424 SNPs (mapping to chromosome BTA12).


Functions for the detection of footprints of selection on
dense SNP data using Extended Homozygosity Haplotype (EHH)
based tests. The package includes computation of EHH, iHS
(within population) and Rsb or XP-EHH (across pairs of populations)
statistics. Various plotting functions are also included to
facilitate visualization and interpretation of the results.

haplohh_cgu_bta12: Example of an `haplohh` object

Description

Usage

Arguments

References

See Also