{"Package":"repo.data","Title":"R Repository Data","Version":"0.1.5","Authors@R":"person(\"Lluís\", \"Revilla Sancho\", , \"lluis.revilla@gmail.com\", role = c(\"aut\", \"cre\", \"cph\"),\ncomment = c(ORCID = \"0000-0001-9747-2570\"))","Description":"Retrieve metadata about packages from repositories to explore\npackage dependencies, links between help pages, aliases, package\navailability on a given date, and other repository dependent outcome.\nThis metadata can be used to help package maintainers and users to\nnavigate changes on dependencies and with reproducibility.","License":"GPL (>= 3)","URL":"https://github.com/llrs/repo.data,\nhttps://llrs.github.io/repo.data/","BugReports":"https://github.com/llrs/repo.data/issues","Depends":"R (>= 4.5)","Imports":"methods, tools, utils","Suggests":"igraph (>= 2.1), knitr (>= 1.49), markdown (>= 1.13),\nrversions (>= 2.1), spelling (>= 2.3)","VignetteBuilder":"knitr","Encoding":"UTF-8","Language":"en-US","LazyData":"true","RoxygenNote":"7.3.2","NeedsCompilation":"no","Packaged":"2025-09-25 06:14:42 UTC; lluis","Author":"Lluís Revilla Sancho [aut, cre, cph] (ORCID:\n)","Maintainer":"Lluís Revilla Sancho ","Repository":"CRAN","Date/Publication":"2025-09-25 09:30:02 UTC","repoType":"cran","tarballUrl":"ftp://cran.r-project.org/pub/R/src/contrib/repo.data_0.1.5.tar.gz","jsonAuthors":[{"name":"Lluís Revilla Sancho","email":"lluis.revilla@gmail.com","maintainer":true}],"readme":"\n\n\n# repo.data\n\n\n\n[![R-CMD-check](https://github.com/llrs/repo.data/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/llrs/repo.data/actions/workflows/R-CMD-check.yaml)\n[![Codecov test\ncoverage](https://codecov.io/gh/llrs/repo.data/graph/badge.svg)](https://app.codecov.io/gh/llrs/repo.data)\n\n\nThe goal of repo.data is to make repository data accessible. Mainly it\nconsumes existing data but the idea is to also generate it.\n\nWhen a function is specific of a repository it will start with its name:\n`cran_` or `bioc_`.\n\n## Installation\n\nFrom CRAN:\n\n``` r\ninstall.packages(\"repo.data\")\n```\n\nYou can install the development version of repo.data like so:\n\n``` r\nremotes::install_github(\"llrs/repo.data\")\n```\n\n## Example\n\nWe can get a data.frame of all packages on CRAN archive:\n\n``` r\nlibrary(repo.data)\nca <- cran_archive()\n#> Warning: There are 4 packages both archived and published\n#> This indicate manual CRAN intervention.\nhead(ca)\n#> Package Datetime Version User Size Status\n#> 1 A3 2013-02-07 10:00:29 0.9.1 hornik 45252 archived\n#> 2 A3 2013-03-26 19:58:40 0.9.2 ligges 45907 archived\n#> 3 A3 2015-08-16 23:05:54 1.0.0 hornik 42810 archived\n#> 4 AalenJohansen 2023-03-01 11:42:11 1.0 ligges 165057 current\n#> 5 aamatch 2025-06-24 11:40:05 0.3.7 ligges 222104 current\n#> 6 aaMI 2005-06-24 17:55:17 1.0-0 root 2968 archived\n```\n\nWe can also check CRAN comments about the packages on its archive:\n\n``` r\ncc <- cran_comments()\n#> Retrieving comments, this might take a bit.\n#> Caching results to be faster next call in this session.\nhead(cc)\n#> package\n#> 1 A3\n#> 2 aaSEA\n#> 3 aba\n#> 4 abbyyR\n#> 5 abcADM\n#> 6 abcdeFBA\n#> comment\n#> 1 Archived on 2025-06-13 as issues were not corrected despite reminders.\n#> 2 Archived on 2022-06-21 as check problems were not corrected despite reminders.\n#> 3 Archived on 2022-03-27 as check problems were not corrected in time.\n#> 4 Archived on 2023-11-03 at the maintainer's request.\n#> 5 Archived on 2023-03-02 as issues were not corrected in time.\n#> 6 Archived on 2022-03-07 as check problems were not corrected in time.\n#> date action\n#> 1 2025-06-13 archived\n#> 2 2022-06-21 archived\n#> 3 2022-03-27 archived\n#> 4 2023-11-03 archived\n#> 5 2023-03-02 archived\n#> 6 2022-03-07 archived\n```\n\nOr estimate the last date of update of our packages, by the information\non the session info or a data.frame:\n\n``` r\ncran_session(session = sessionInfo())\n#> [1] \"2025-08-27 18:40:06 CEST\"\nip <- installed.packages()\ncran_date(ip)\n#> Warning in cran_archive(versions[, \"Package\"]): Omitting packages airway, alabaster.base, alabaster.matrix, alabaster.ranges, alabaster.sce, alabaster.schemas, alabaster.se, annotate, AnnotationDbi, AnnotationFilter, AnnotationHub, assorthead, Biobase, BiocFileCache, BiocGenerics, BiocIO, BioCor, BiocParallel, BiocPkgTools, BiocStyle, BiocVersion, biocViews, biomformat, Biostrings, cransays, DelayedArray, DESeq2, ensembldb, ExperimentHub, fgsea, GenomeInfoDb, GenomeInfoDbData, GenomicAlignments, GenomicFeatures, GenomicRanges, GO.db, GOSemSim, GSEABase, gypsum, h5mread, HDF5Array, IRanges, KEGGREST, MatrixGenerics, microshades, org.Hs.eg.db, phyloseq, preprocessCore, ProtGenerics, reactome.db, resios, rhdf5, rhdf5filters, Rhdf5lib, Rhtslib, rostemplate, rotemplate, Rsamtools, rtracklayer, rutils, S4Arrays, S4Vectors, scRNAseq, SingleCellExperiment, SparseArray, SummarizedExperiment, UCSC.utils, XVector.\n#> Maybe they were not on CRAN?\n#> [1] \"2025-08-29 16:00:06 CEST\"\n```\n\n## Related packages\n\nOther packages and related analysis :\n\n- Task views: \n- static packages: [pkgstats](https://docs.ropensci.org/pkgstats/)\n- Bioconductor: biopkgtools\n- R-universe: universe\n- [cranly](https://cran.r-project.org/package=cranly): About package\n dependencies and authors of packages.\n- [versions](https://github.com/goldingn/versions): A package about\n installing packages versions. `install.dates()` requires a CRAN date,\n if you are unsure you can use `cran_date()` to estimate it given a\n `library()` or a `sessionInfo` report.\n- [checkpoint](https://cran.r-project.org/package=checkpoint) provides\n tools to ensure the results of R code are repeatable over time.\n\n## History\n\nThis package comes from the analysis on CRAN data on ","jobInfo":{"package":"repo.data","version":"0.1.5","parsingStatus":"success","parserVersion":2,"parsedAt":"2025-09-25T12:29:49+0000"}}

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