plotInbag

Plot distribution of the fraction of trees that samples were
 inbag in the Random Forest model.

Estimate significance of importance metrics
for a Random Forest model by permuting the response
variable. Produces null distribution of importance
metrics for each predictor variable and p-value of
observed. Provides summary and visualization functions for 'randomForest'
results.

Eric Archer

rfPermute

Estimate Permutation p-Values for Random Forest Importance
Metrics

plotInbag function

<dl><dt>x</dt>
<dd>a <code>rfPermute</code> or <code>randomForest</code> model object..</dd>
<dt>bins</dt>
<dd>number of bins in histogram.</dd>
<dt>replace</dt>
<dd>was sampling done with or without replacement?</dd>
<dt>sampsize</dt>
<dd>sizes of samples drawn. Either a single value or vector of 
sample sizes as long as the number of classes.</dd>
<dt>plot</dt>
<dd>display the plot?</dd></dl>

Arguments

Eric Archer <a href="/link/eric.archer%40noaa.gov?package=rfPermute&version=2.5.2" data-mini-rdoc="rfPermute::eric.archer@noaa.gov">eric.archer@noaa.gov</a>

Author

Plot Inbag distribution — plotInbag

<dl>

<dt>x</dt>
<dd>a <code>rfPermute</code> or <code>randomForest</code> model object..</dd>


<dt>bins</dt>
<dd>number of bins in histogram.</dd>


<dt>replace</dt>
<dd>was sampling done with or without replacement?</dd>


<dt>sampsize</dt>
<dd>sizes of samples drawn. Either a single value or vector of 
sample sizes as long as the number of classes.</dd>


<dt>plot</dt>
<dd>display the plot?</dd>

</dl>

Eric Archer <a href='mailto:eric.archer@noaa.gov'>eric.archer@noaa.gov</a>

plotInbag: Plot Inbag distribution

Description

Usage

Value

Arguments

Author

Examples