The rflexscan package provides functions and classes to analyze spatial count data using the flexible spatial scan statistic developed by Tango and Takahashi (2005). This package designed for any of the following interrelated purposes:
To evaluate reported spatial disease clusters, to see if they are statistically significant.
To test whether a disease is randomly distributed over space.
To perform geographical surveillance of disease, to detect areas of significantly high rates.
This package implements a wrapper for the C routine used in the FleXScan 3.1.2 developed by Takahashi, Yokoyama, and Tango.
Otani T. and Takahashi K. (2021). Flexible scan statistics for detecting spatial disease clusters: The rflexscan R package, Journal of Statistical Software 99:13.
Tango T. and Takahashi K. (2005). A flexibly shaped spatial scan statistic for detecting clusters, International Journal of Health Geographics 4:11.
Takahashi K, Yokoyama T and Tango T. (2010). FleXScan v3.1: Software for the Flexible Scan Statistic. National Institute of Public Health, Japan, https://sites.google.com/site/flexscansoftware/home.
rflexscan