raref: Estimates the species richness for a given number of sampled individuals on the basis of the corresponding rarefaction curve
Description
raref computes rarefaction curve and interpolates the species richness corresponding to a given density of individuals.
Usage
raref(matrix, dens, nrandom=99)
Arguments
matrix
matrix is a typical species-sample matrix. Rows correspond to samples whereas columns stand for species.
dens
A number corresponding to the density for which a species richness estimation is required. dens must be comprised within the range of the observed density.
nrandom
nrandom is the number of a randomizations used in the bootstrap estimation. Values of nrandom
Value
returns a list with two components.
returns a list with two components.
References
Gotelli, N., Colwell, R. (2001). Quantifying biodiversity: procedures and pitfalls in the
measurement and comparison of species richness. Ecology Letters 4, 379-391.