riemtan (version 0.2.5)

ParquetBackend: ParquetBackend Class

Description

Backend implementation using Apache Arrow Parquet files with lazy loading. Matrices are stored as individual Parquet files and loaded on-demand with LRU caching.

Super class

riemtan::DataBackend -> ParquetBackend

Methods

Public methods

• ParquetBackend$new()

• ParquetBackend$get_matrix()

• ParquetBackend$get_all_matrices()

• ParquetBackend$get_matrices_parallel()

• ParquetBackend$length()

• ParquetBackend$get_dimensions()

• ParquetBackend$get_metadata()

• ParquetBackend$clear_cache()

• ParquetBackend$get_cache_size()

• ParquetBackend$clone()

---

Method new()

Load metadata from JSON file

Load a matrix from Parquet file

Update LRU cache with a new matrix

Initialize a ParquetBackend

Usage

ParquetBackend$new(data_dir, cache_size = 10)

Arguments

data_dir

Path to directory containing Parquet files and metadata.json

cache_size

Maximum number of matrices to cache (default 10)

i

Integer index

i

Integer index

mat

A dppMatrix object

Returns

A dppMatrix object

---

Method get_matrix()

Get a specific matrix by index

Usage

ParquetBackend$get_matrix(i)

Arguments

i

Integer index

Returns

A dppMatrix object

---

Method get_all_matrices()

Get all matrices (loads all from disk if necessary)

Usage

ParquetBackend$get_all_matrices(parallel = NULL, progress = FALSE)

Arguments

parallel

Logical indicating whether to use parallel loading (default: NULL, auto-detect)

progress

Logical indicating whether to show progress (default: FALSE)

Returns

A list of dppMatrix objects

---

Method get_matrices_parallel()

Load multiple matrices in parallel (batch loading)

Usage

ParquetBackend$get_matrices_parallel(indices, progress = FALSE)

Arguments

indices

Vector of integer indices to load

progress

Logical indicating whether to show progress (default: FALSE)

Returns

A list of dppMatrix objects

---

Method length()

Get the number of matrices

Usage

ParquetBackend$length()

Returns

Integer count

---

Method get_dimensions()

Get matrix dimensions

Usage

ParquetBackend$get_dimensions()

Returns

Integer p (matrices are p x p)

---

Method get_metadata()

Get metadata

Usage

ParquetBackend$get_metadata()

Returns

List containing metadata information

---

Method clear_cache()

Clear the cache

Usage

ParquetBackend$clear_cache()

---

Method get_cache_size()

Get current cache size

Usage

ParquetBackend$get_cache_size()

Returns

Integer number of cached matrices

---

Method clone()

The objects of this class are cloneable with this method.

Usage

ParquetBackend$clone(deep = FALSE)

Arguments

deep

Whether to make a deep clone.