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rioja (version 0.9-6)

Analysis of Quaternary Science Data

Description

Functions for the analysis of Quaternary science data, including constrained clustering, WA, WAPLS, IKFA, MLRC and MAT transfer functions, and stratigraphic diagrams.

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Version

Install

install.packages('rioja')

Monthly Downloads

1,061

Version

0.9-6

License

GPL (>= 2)

Maintainer

Steve Juggins

Last Published

April 4th, 2016

Functions in rioja (0.9-6)

IK

Imbrie and Kipp foraminifera data
compare.datasets

Compare datasets for matching variables (species)
aber

Abernethy Forest pollen data
WA

Weighted averaging (WA) regression and calibration
read.CEP

Reads and writes data in Cornell Ecology Program (CEP) format
utils

Utility functions.
MLRC

Palaeoenvironmental reconstruction using Maximum Likelihood Response Surfaces
rioja-internal

Internal rioja functions.
IKFA

Imbrie & Kipp Factor Analysis
LWR

Weighted averaging (LWR) regression and calibration
SWAP

SWAP surface sediment diatom data and lake-water pH.
gutils

Graphic utilities.
PTF

Palaeoecological transfer functions
strat.plot.simple

Plot a simple stratigraphic diagram
strat.plot

Plot a stratigraphic diagram
WAPLS

Weighted averaging partial least squares (WAPLS) regression and calibration
MAT

Palaeoenvironmental reconstruction using the Modern Analogue Technique (MAT)
Merge

Merges two or more data frames on the basis of common column names.
chclust

Constrained hierarchical clustering
Ponds

Southeast England ponds and pools diatom and water chemistry dataset.
sp.plot

Plots species distributions along an environmental gradient
read.Tilia

Read data in Tilia format
interp.dataset

Interpolate a dataset
rioja-package

Analysis of Quaternary Science Data
read.C2Model

Imports results from a C2 model into R
inkspot

Two-way ordered bubble plot of a species by sites data table
RLGH

Diatom stratigraphic data from the Round Loch of Glenhead, Galloway, Southwest Scotland
MR

Multiple regression