ccGeneHuman

datasets

Uses an extension of nonnegative matrix factorization to identify shared and dataset-specific factors. See Welch J, Kozareva V, et al (2019) <doi:10.1016/j.cell.2019.05.006>, and Liu J, Gao C, Sodicoff J, et al (2020) <doi:10.1038/s41596-020-0391-8> for more details.

Yichen Wang

rliger

Linked Inference of Genomic Experimental Relationships

Joshua Welch

Chao Gao

Jialin Liu

Joshua Sodicoff

Velina Kozareva

Evan Macosko

Paul Hoffman

Ilya Korsunsky

Robert Lee

Andrew Robbins

ccGeneHuman function

A list of two character vectors:<dl>
<dt>s.genes</dt>
<dd>Genes associated with S-phase</dd><dt>g2m.genes</dt>
<dd>Genes associated with G2M-phase</dd>
</dl>

Format

Cell cycle gene set for human — ccGeneHuman

A list of two character vectors:<dl>
<dt>s.genes</dt>
<dd>Genes associated with S-phase</dd>

<dt>g2m.genes</dt>
<dd>Genes associated with G2M-phase</dd>


</dl>

Cell cycle gene set for human

ccGeneHuman: Cell cycle gene set for human

Description

Usage

Arguments

Format