get_collection: Get a collection of networks

Description

Retrieve a set of networks based on the results of one of the search_*() function. The function also accepts a numeric vector of Mangal network IDs.

Usage

get_collection(x, ...)
# S3 method for default
get_collection(x, ...)
# S3 method for mgSearchDatasets
get_collection(x, ...)
# S3 method for mgSearchNetworks
get_collection(x, ...)
# S3 method for mgSearchReferences
get_collection(x, ...)
# S3 method for mgSearchNodes
get_collection(x, ...)
# S3 method for mgSearchTaxonomy
get_collection(x, ...)
# S3 method for mgSearchInteractions
get_collection(x, ...)

Value

Returns a object of class mgNetworksCollection which is a collection (actually, a list) of mgNetwork objects get_network_by_id()).

Arguments

x: numeric vector of Mangal network IDs or an object returned from any search_*() function.
...: arguments to be passed on to get_network_by_id().

Methods (by class)

get_collection(default): Get a collection of networks (default).
get_collection(mgSearchDatasets): Get a collection of networks from a mgSearchDatasets object.
get_collection(mgSearchNetworks): Get a collection of networks from a mgSearchNetworks object.
get_collection(mgSearchReferences): Get a collection of networks from a mgSearchReferences object.
get_collection(mgSearchNodes): Get a collection of networks from a mgSearchNodes object.
get_collection(mgSearchTaxonomy): Get a collection of networks from a mgSearchTaxonomy object.
get_collection(mgSearchInteractions): Get a collection of networks from a mgSearchInteractions object.

Examples

Run this code

# \donttest{
mg_2 <- get_collection(c(1076:1077))
mg_anemone <- get_collection(search_networks(query = "anemone%"))
# }