toAnalysisSoftware

From an ID, e.g. "MS:1003162" (for PTX-QC), and some additional information,
create an 'analysisSoftware' node for mzQC

Reads, writes and validates 'mzQC' files. The 'mzQC' format is a
standardized file format for the exchange, transmission, and archiving of
quality metrics derived from biological mass spectrometry data, as defined
by the HUPO-PSI (Human Proteome Organisation - Proteomics Standards Initiative)
Quality Control working group.
See <https://hupo-psi.github.io/mzQC/> for details.

Chris Bielow

rmzqc

Creation, Reading and Validation of 'mzqc' Files

David Jimenez-Morales

Jeremi Maciejewski

toAnalysisSoftware function

<dl><dt>id</dt>
<dd>The CV accession</dd>
<dt>version</dt>
<dd>The version of the tool which created the metric/mzQC</dd>
<dt>uri</dt>
<dd>URI to the homepage, or if NULL (default), will be extracted from the definition in the PSI MS-CV (if possible)</dd>
<dt>value</dt>
<dd>An optional name for the software (if different from the CV's name)</dd></dl>

Arguments

From an ID, e.g. "MS:1003162" (for PTX-QC), and some additional information,
create an 'analysisSoftware' node for mzQC — toAnalysisSoftware

<dl>

<dt>id</dt>
<dd>The CV accession</dd>


<dt>version</dt>
<dd>The version of the tool which created the metric/mzQC</dd>


<dt>uri</dt>
<dd>URI to the homepage, or if NULL (default), will be extracted from the definition in the PSI MS-CV (if possible)</dd>


<dt>value</dt>
<dd>An optional name for the software (if different from the CV's name)</dd>

</dl>

toAnalysisSoftware: From an ID, e.g. "MS:1003162" (for PTX-QC), and some additional information, create an 'analysisSoftware' node for mzQC

Description

Usage

Value

Arguments

Examples