rnaSeqMap (version 2.30.0)

measures: Measures

Description

Various measures to find differential expression.

Usage

ks_test(dd)
diff_area(dd, cconst)
diff_derivative_area(dd, cconst)
qq_plot(dd)
qq_derivative_plot(dd)
pp_plot(dd)
pp_derivative_plot(dd)
hump_diff1(dd)
hump_diff2 (dd)

Arguments

dd

a matrix with 2 columns for samples and rows for nucleotides, containing coverage data (like from BED files)

cconst

NULL default

Examples

# if (xmapConnected())  
#  {
#   ks_test(dd)
#  }