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rockchalk (version 1.8.92)

Regression Estimation and Presentation

Description

A collection of functions for ease of presentation and interpretation of regression analysis. These functions are used to produce the statistics lectures in http://pj.freefaculty.org/guides. There are functions to explore the effect (or lack thereof) from "mean centering," "residual centering", and standardization. The vignette "rockchalk" offers a fairly comprehensive overview. The vignette "Rstyle" has advice about coding in R. See the outreg function for a convenient way to generate regression models for reports. For nice, easy to use pictures, see plotSlopes, plotCurves, plotPlane. The package title "rockchalk" refers to our school motto, "Rock Chalk Jayhawk, Go K.U.".

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Version

Install

install.packages('rockchalk')

Monthly Downloads

13,676

Version

1.8.92

License

GPL (>= 3.0)

Maintainer

Paul Johnson

Last Published

February 13th, 2015

Functions in rockchalk (1.8.92)

addLines

Superimpose regression lines on a plotted plane
combineLevels

recode a factor by "combining" levels
getAuxRsq

retrieves estimates of the coefficient of determination from a list of regressions
model.data.default

Create a data frame suitable for estimating a model
plotSlopes

Generic function for plotting regressions and interaction effects
getPartialCor

Calculates partial correlation coefficients after retrieving data matrix froma fitted regression model
checkIntFormat

A way of checking if a string is a valid file name.
outreg

Creates a publication quality result table for regression models. Works with models fitted with lm, glm, as well as lme4.
plot.testSlopes

Plot testSlopes objects
pctable

Creates a cross tabulation with counts and percentages
plotPlane

Draw a 3-D regression plot for two predictors from any linear or nonlinear lm or glm object
testSlopes

Hypothesis tests for Simple Slopes Objects
cutBySD

Returns center values of x, the mean, mean-std.dev, mean+std.dev
lazyCor

Create correlation matrices.
religioncrime

Religious beliefs and crime rates
residualCenter

Calculates a "residual-centered" interaction regression.
vech2Corr

Convert the vech (column of strictly lower trianglar values from a matrix) into a correlation matrix.
genCorrelatedData

Generates a data frame for regression analysis
cutByQuantile

Calculates the "center" quantiles, always including the median, when n is odd.
magRange

magRange Magnify the range of a variable.
lmAuxiliary

Estimate leave-one-variable-out regressions
summarize

Sorts numeric from factor variables and returns separate summaries for those types of variables.
getVIF

Converts the R-square to the variance inflation factor
makeSymmetric

Create Symmetric Matrices, possibly covariance or correlation matrices, or check a matrix for symmetry and serviceability.
centralValues

Central Tendency estimates for variables
checkPosDef

Check a matrix for positive definitness
formatVC

formatter for merMod objects copied from lme4
lazyCov

Create covariance matrix from correlation and standard deviation information
getFocal

Select focal values from an observed variable.
model.data

Create a "raw" (UNTRANSFORMED) data frame equivalent to the input data that would be required to fit the given model.
cutByTable

Select most frequently occurring values from numeric or categorical variables.
print.pctable

Display pctable objects
vech2mat

Convert a half-vector (vech) into a matrix.
plotCurves

Assists creation of predicted value curves for regression models.
predictOMatic

Create predicted values after choosing values of predictors. Can demonstrate marginal effects of the predictor variables.
summarizeNumerics

Extracts numeric variables and presents an alphabetized summary in a workable format.
mcGraph1

Illustrate multicollinearity in regression, part 1.
plotSeq

Create sequences for plotting
plotFancy

Regression plots with predicted value lines, confidence intervals, color coded interactions
perspEmpty

perspEmpty
summary.pctable

Extract presentation from a pctable object
standardize

Estimate standardized regression coefficients for all variables
print.summary.pctable

print method for summary.pctable objects
focalVals

Create a focal value vector.
getDeltaRsquare

Calculates the delta R-squares, also known as squared semi-partial correlation coefficients.
mcDiagnose

Multi-collinearity diagnostics
meanCenter

meanCenter
outreg2HTML

Convert LaTeX output from outreg to HTML markup
makeVec

makeVec for checking or creating vectors
centerNumerics

Find numeric columns, center them, re-name them, and join them with the original data.
newdata

Create a newdata frame for usage in predict methods
cheating

Cheating and Looting in Japanese Electoral Politics
padW0

Pad with 0's.
print.factorSummaries

Prints out the contents of an object created by summarizeFactors in the style of base::summary
mvrnorm

Minor revision of mvrnorm (from MASS) to facilitate replication
summarizeFactors

Extracts non-numeric variables, calculates summary information, including entropy as a diversity indicator.
predictCI

Calculate a predicted value matrix (fit, lwr, upr) for a regression, either lm or glm, on either link or response scale.
genCorrelatedData2

Generates a data frame for regression analysis.
rockchalk-package

Miscellaneous regression functions
outreg0

Creates a publication quality result table for regression models. outreg0 is the last version in the last development stream.
summary.factor

Tabulates observed values and calculates entropy