roots (version 1.0)

sparseMarkov: Make markov matrix sparse

Description

Make markov matrix sparse

Usage

sparseMarkov(mkv, knn)

Arguments

mkv

Markov matric

knn

Number of nearest neighbours. See above.

Value

Markovian sparse matrix.

Details

Make markov matrix sparse Choose knn as the maximum number of similar cells are likely to exist in your dataset.