rphast (version 1.0)

from.pointer.msa: MSA From Pointer

Description

Take an MSA stored by reference and return one stored in R

Usage

from.pointer.msa(src)

Arguments

src

an MSA object stored by reference

Value

• an MSA object stored in R. If src is already stored in R, returns a copy of the object.

See Also

msa for details on MSA storage options.

Examples

m <- msa(seqs=c("A--ACGTAT", "AG-AGGTAA", "AGGAGGTAG"),
         names=c("human", "mouse", "rat"), pointer.only=TRUE)
m
m <- from.pointer.msa(m)
m