rphast (version 1.0)

rename.tree: Tree Node Renaming

Description

Rename nodes of trees

Usage

rename.tree(tree, old.names, new.names)

Arguments

tree

A vector of character strings, each containing a newick tree

old.names

A vector of current names to be substituted

new.names

A vector of equal length to old.names giving the substitutions

Value

• A vector of character strings, in which all nodes with names given in old.names are replaced with values from new.names