probe_info_450k

A list of 450K probe information for <code>bmiq_norm_450k</code> function. The
probes are already filtered and ordered the same way to the input when we
developed our placental epigenetic clock.

dataset

Placental epigenetic clock to estimate aging based on gestational age using DNA methylation levels, so called placental epigenetic clock (PlEC). We developed a PlEC for the 2024 Placental Clock DREAM Challenge (<https://www.synapse.org/Synapse:syn59520082/wiki/628063>). Our PlEC achieved the top performance based on an independent test set. PlEC can be used to identify accelerated/decelerated aging of placenta for understanding placental dysfunction-related conditions, e.g., great obstetrical syndromes including preeclampsia, fetal growth restriction, preterm labor, preterm premature rupture of the membranes, late spontaneous abortion, and placental abruption. Detailed methodologies and examples are documented in our vignette, available at <https://herdiantrisufriyana.github.io/rplec/doc/placental_aging_analysis.html>.

Herdiantri Sufriyana

rplec

Placental Epigenetic Clock to Estimate Aging by DNA Methylation

Emily Chia-Yu Su

probe_info_450k function

A list of 2 elements where each has a length of 346407:<dl>
<dt>Design</dt>
<dd>An integer indicating design type 1 or 2.</dd><dt>probeID</dt>
<dd>A character for each probe identifier.</dd>
</dl>

Format

Probe info for 450K — probe_info_450k

A list of 2 elements where each has a length of 346407:<dl>
<dt>Design</dt>
<dd>An integer indicating design type 1 or 2.</dd>

<dt>probeID</dt>
<dd>A character for each probe identifier.</dd>


</dl>

probe_info_450k: Probe info for 450K

Description

Usage

Arguments

Format