t1_preprocess

Process 'MRI' and align with template brains

Provides portable access from 'R' to biomedical image processing toolbox
'ANTs' by Avants et al. (2009) <doi:10.54294/uvnhin> via seamless
integration with the 'Python' implementation 'ANTsPy'. Allows biomedical
images to be processed in 'Python' and analyzed in 'R', and vice versa
via shared memory. See 'citation("rpyANTs")' for more reference information.

Zhengjia Wang

rpyANTs

An Alternative Advanced Normalization Tools ('ANTs')

t1_preprocess function

<dl><dt>t1_path</dt>
<dd>path to a 'T1' image</dd>
<dt>templates</dt>
<dd>template to use; default is <code>'mni_icbm152_nlin_asym_09a'</code>,</dd>
<dt>work_path</dt>
<dd>working path, must be a directory</dd>
<dt>verbose</dt>
<dd>whether to verbose the progress</dd></dl>

Arguments

Process 'T1' image — t1_preprocess

<dl>

<dt>t1_path</dt>
<dd>path to a 'T1' image</dd>


<dt>templates</dt>
<dd>template to use; default is <code>'mni_icbm152_nlin_asym_09a'</code>,</dd>


<dt>work_path</dt>
<dd>working path, must be a directory</dd>


<dt>verbose</dt>
<dd>whether to verbose the progress</dd>

</dl>

State of Data and AI Literacy Report 2025

t1_preprocess: Process 'T1' image

Description

Usage

Value

Arguments