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rrBLUP (version 4.0)

Ridge regression and other kernels for genomic selection

Description

Software for genomic prediction with the RR-BLUP mixed model. One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.

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Version

Install

install.packages('rrBLUP')

Monthly Downloads

2,277

Version

4.0

License

GPL-3

Maintainer

Jeffrey Endelman

Last Published

September 18th, 2012

Functions in rrBLUP (4.0)

kin.blup

Genotypic value prediction based on kinship

A.mat

Additive relationship matrix

mixed.solve

Mixed-model solver

rrBLUP-package

Ridge regression and other kernels for genomic selection

GWA

Genome-wide association analysis

kinship.BLUP

Genomic prediction by kinship-BLUP (deprecated)