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rrBLUP (version 4.6.1)

Ridge Regression and Other Kernels for Genomic Selection

Description

Software for genomic prediction with the RR-BLUP mixed model (Endelman 2011, ). One application is to estimate marker effects by ridge regression; alternatively, BLUPs can be calculated based on an additive relationship matrix or a Gaussian kernel.

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Version

Install

install.packages('rrBLUP')

Monthly Downloads

2,233

Version

4.6.1

License

GPL-3

Maintainer

Jeffrey Endelman

Last Published

December 18th, 2019

Functions in rrBLUP (4.6.1)

GWAS

Genome-wide association analysis
rrBLUP-package

Ridge regression and other kernels for genomic selection
mixed.solve

Mixed-model solver
A.mat

Additive relationship matrix
kin.blup

Genotypic value prediction based on kinship
kinship.BLUP

Genomic prediction by kinship-BLUP (deprecated)