rsat (version 0.1.21)

get_database: Extracts or assign the path of the database

Description

Extracts the path to the database from an rtoi/package environment. If both, environment and rtoi database are defined the rtoi database is used.

Usage

get_database(x)
# S4 method for rtoi
get_database(x)
# S4 method for missing
get_database()
set_database(x, ...)
# S4 method for rtoi
set_database(x, value)
# S4 method for character
set_database(x)

Value

the database path of an rtoi

Arguments

x

an rtoi object.

...

additional arguments.

value

character argument. The value for change the database directory of x.

Examples

if (FALSE) {
# load example rtoi
file.copy(from=system.file("ex/Navarre",package="rsat"),
         to=tempdir(),
         recursive = TRUE)

navarre <- read_rtoi(file.path(tempdir(),"Navarre"))

# get the databse used by navarre
get_database(navarre)

# set the a new database path
set_database(navarre,"new_path")

# get the database used by rsat by default
get_database()

# set the a new database path for the entire environment
set_database("new_path")
}