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rsbml (version 2.30.0)

CVTerm-class: SBML Type "CVTerm"

Description

A MIRIAM annotation, consisting of a qualifier ("model", "biological" or something else) and a resource (URI).

Arguments

Objects from the Class

Objects can be created by calls of the form new("CVTerm", ...).

Slots

qualifierType:
Object of class "character" specifying the type of qualifier for this term. Types "model" and "biological" have special meaning, but any string may be specified.
modelQualifierType:
Object of class "character" specifying the type of model qualifier, if qualifierType is set to "model". Types "is" and "isDescribedBy" are formally defined in MIRIAM, but any string may be specified.
biologicalQualifierType:
Object of class "character" specifying the type of biological qualifier, if qualifierType is set to "biological". Types "is", "hasPart", "isPartOf", "isVersionOf", "hasVersion", "isHomologTo", and "isDescribedBy" are formally defined in MIRIAM, though any string may be specified.
resources:
Object of class "character" specifying a URI that identifies some resource related an SBML element by the qualifier.

Methods

biologicalQualifierType
signature(object = "CVTerm"): gets the biologicalQualifierType slot.
biologicalQualifierType<-
signature(object = "CVTerm"): sets the biologicalQualifierType slot.
modelQualifierType
signature(object = "CVTerm"): gets the modelQualifierType slot.
modelQualifierType<-
signature(object = "CVTerm"): sets the modelQualifierType slot.
qualifierType
signature(object = "CVTerm"): gets the qualifierType slot.
qualifierType<-
signature(object = "CVTerm"): sets the qualifierType slot.
resources
signature(object = "CVTerm"): gets the resources slot.
resources<-
signature(object = "CVTerm"): sets the resources slot.

References

http://sbml.org/documents/