rsnps (version 0.2.0)

annotations: Get all phenotypes, their variations, and how many users have data available for a given phenotype.

Description

Either return data.frame with all results, or output a list, then call the charicteristic by id (paramater = "id") or name (paramater = "characteristic").

Usage

annotations(snp = NA, output = c("all", "plos", "mendeley", "snpedia",
  "metadata"), ...)

Arguments

snp

SNP name.

output

Name the source or sources you want annotations from (options are: 'plos', 'mendeley', 'snpedia', 'metadata'). 'metadata' gives the metadata for the response.

...

Curl options passed on to GET.

Value

Data.frame of results.

Examples

# NOT RUN {
# Get all data
## get just the metadata
annotations(snp = 'rs7903146', output = 'metadata')

## just from plos
annotations(snp = 'rs7903146', output = 'plos') 

## just from snpedia
annotations(snp = 'rs7903146', output = 'snpedia')

## get all annotations
annotations(snp = 'rs7903146', output = 'all') 
# }