rtemis (version 1.4.3)

plot_manhattan: Plot a MassGLM Result

Description

plot(model) draws a volcano plot using rtemis.draw. plot_manhattan(model) draws categorical significance bars, preserving outcome order. Both select one coefficient and use the shared rtemis.draw::SignificanceConfig statistical contract via rtemis.draw::draw_volcano() or rtemis.draw::draw_manhattan().

Usage

plot_manhattan(x, coefname = NULL, ...)
plot_manhattan.MassGLM(x, coefname = NULL, ...)
# S3 method for MassGLM
plot(x, ...)

Value

An ECharts htmlwidget.

Arguments

x

rtemis::MassGLM: Fitted mass-univariate model.

coefname

Optional Character scalar: Coefficient to plot. Unset selects the first entry in the object's coefnames.

...

Named settings for rtemis.draw::draw_volcano() or rtemis.draw::draw_manhattan().

Details

plot_manhattan.MassGLM() is deprecated; use plot_manhattan().

Examples

if (FALSE) { # interactive()
model <- massGLM(mtcars["wt"], mtcars[c("mpg", "hp", "disp")],
                         verbosity = 0L)
plot(model, coefname = "wt")
plot_manhattan(model, coefname = "wt")
}