write.ms

<p>File to write (will be overwritten).  If NULL, output
goes to terminal.</p>

file

<p>Writes a multiple sequence (MS) object to a FASTA file.</p>

fasta

Identifies and scores possible Transcription Factor
Binding Sites and allows for FDR analysis and pruning.  It supports
splitting of sequences based on size or a specified GFF, grouping
by G+C content, and specification of Markov model order.  The heavy
lifting is done in C while all results are made available via R.

write.ms: Writing MS Object to FASTA file

Description

Usage

Arguments