rtimicropem v1.4.0
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Supports the Analysis of RTI MicroPEM Output Files
Supports the input and reproducible analysis of RTI
MicroPEM output files.
Functions in rtimicropem
| Name | Description | |
| convert_output | Uses output file from MicroPEM to create a micropem object. | |
| identify_lags | Identify time gaps in the data collection period | |
| CHAI | A micropem output file. | |
| micropem | An R6 class to represent MicroPEM output information. | |
| micropemC1 | A micropem object. | |
| Columbia | A micropem output file. | |
| rtimicropem-package | Supports the analyses of RTI MicroPEM output files. | |
| run_shiny_app | Run a built-in Shiny App. | |
| Columbia2 | A micropem output file. | |
| batch_convert | Reading several MicroPEM files and saving the settings and measurement tables to csv. | |
| micropemC2 | A micropem object. | |
| chai_alarm | Generates alarm indicators for a micropem object. | |
| micropemChai | A micropem object. | |
| clean_measures | Outputs clean rh_corrected_nephelometer measures for analysis. | |
| No Results! | ||
Vignettes of rtimicropem
| Name | ||
| chai_data_cleaning.Rmd | ||
| outputRTI.png | ||
| p2.html | ||
| rtimicropem.Rmd | ||
| shinyTabAlarm.png | ||
| shinyTabPlot.png | ||
| shinyTabSettings.png | ||
| shinyTabSummary.png | ||
| No Results! | ||
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Details
| Type | Package |
| License | GPL (>= 2) |
| URL | https://github.com/ropensci/rtimicropem, https://docs.ropensci.org/rtimicropem/ |
| BugReports | https://github.com/ropensci/rtimicropem/issues |
| VignetteBuilder | knitr |
| Encoding | UTF-8 |
| LazyData | TRUE |
| RoxygenNote | 6.1.1 |
| NeedsCompilation | no |
| Packaged | 2019-05-15 08:57:08 UTC; maelle |
| Repository | CRAN |
| Date/Publication | 2019-05-15 09:40:03 UTC |
| imports | changepoint , dplyr (>= 0.4.3) , fs , ggplot2 , knitr , lazyeval , lubridate , methods , R6 , rbokeh , readr , stringr , tibble , tidyr |
| suggests | DT , rmarkdown , shiny , testthat , xtable |
| depends | R (>= 3.3.0) |
| Contributors | Zheng Zhou, ERC Grant Agreement number 336167 - the CHAI Project, Carles Mil<c3><a0>, Sreekanth Vakacherla, Cathryn Tonne, Julian Marshall, Lucy D'Agostino McGowan, Kara Woo |
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