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rtmsEcho (version 0.2.4)

getWiffShots: List of Shot Names in a given Wiff File

Description

List of Shot Names in a given Wiff File

Usage

getWiffShots(wiff)

Value

A character vector containing the shot names for all shots fired in each run in a given file. Note: not necessarily in the correct order (see Details).

Arguments

wiff

A wiff reader object of class rtmsWiffReader

Details

The .wiff file includes these shot names in the order in which they were input by the user. They are generally names of wells in a plate, but the order in which they are given by the user is not necessarily the order in which the EchoMS will sample them. By default, the EchoMS will use a more "efficient" ordering, moving back and forth across the rows of the plate. So the shot names here may not correlate in order with the measurements represented by the intensities in the total ion chromatogram.

Examples

Run this code
wiff <- exampleWiff

shots <- getWiffShots(wiff)

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