BrowserSession-class

show,BrowserSession-method

range,BrowserSession-method

genome,BrowserSession-method

genome<-,BrowserSession-method

names,BrowserSession-method

trackNames,BrowserSession-method

An object representing a genome browser session. As a
  derivative of <code><links4class>TrackDb</links4class></code>, each
  session contains a set of loaded tracks. In addition, it has
  a set of views, in the form of <code><links4class>BrowserView</links4class></code>
  instances, on those tracks. Note that
  this is a virtual class; a concrete implementation is provided by each
  backend driver.

classes

Extensible framework for interacting with multiple genome 
  browsers (currently UCSC built-in) and manipulating 
  annotation tracks in various formats (currently GFF, BED, bedGraph, BED15,
  WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the
  supported browsers, as well as query and modify the browser state, such as the
  current viewport.

Michael Lawrence

rtracklayer

R interface to genome browsers and their annotation tracks

BrowserSession-class function

A virtual Class: No objects may be
  created from it. See <code><a href="/link/browserSession?package=rtracklayer&version=1.32.0" rd-options="" data-mini-rdoc="rtracklayer::browserSession">browserSession</a></code> for obtaining
  an instance of an implementation for a particular genome browser.

Objects from the Class

An object representing a genome browser session. As a
  derivative of <code><linkS4class>TrackDb</linkS4class></code>, each
  session contains a set of loaded tracks. In addition, it has
  a set of views, in the form of <code><linkS4class>BrowserView</linkS4class></code>
  instances, on those tracks. Note that
  this is a virtual class; a concrete implementation is provided by each
  backend driver.

BrowserSession-class: Class "BrowserSession"

Description

Arguments

Objects from the Class

See Also