wigToBigWig

Path or URL to the WIG file. Connections are not supported.

<code><links4class>Seqinfo</links4class></code> object, describing the genome of the
    data. All BigWig files must have this defined.

seqinfo

The path to which to write the BigWig file. Defaults to <code>x</code>
    with the extension changed to <dquote>bw</dquote>.

dest

If <code>TRUE</code>, regions outside of <code>seqinfo</code> will be clipped,
    so that no error is thrown.

clip

This function calls the Kent C library to efficiently convert a WIG
  file to a BigWig file, without loading the entire file into
  memory. This solves the problem where simple tools write out text WIG
  files, instead of more efficiently accessed binary BigWig files.

Extensible framework for interacting with multiple genome 
  browsers (currently UCSC built-in) and manipulating 
  annotation tracks in various formats (currently GFF, BED, bedGraph, BED15,
  WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the
  supported browsers, as well as query and modify the browser state, such as the
  current viewport.

Michael Lawrence

rtracklayer

R interface to genome browsers and their annotation tracks

wigToBigWig function

<code><linkS4class>Seqinfo</linkS4class></code> object, describing the genome of the
    data. All BigWig files must have this defined.

The path to which to write the BigWig file. Defaults to <code>x</code>
    with the extension changed to <dQuote>bw</dQuote>.

wigToBigWig: Convert WIG to BigWig

Description

Usage

Arguments

See Also